AMR Signal Dataset

Antimicrobial Resistance (AMR) signals for models and preparedness teams.

An AI-ready dataset for measured Antimicrobial Resistance (AMR) observations, antibiotic-use trends, susceptibility context, genotype markers, reporting periods, locations, organization-level provenance, RAG-ready retrieval records, and model-feature exports.

Default dataset

United States Antimicrobial Resistance (AMR) Priority Pathogens dataset

Rows are organized by pathogen, antimicrobial, reporting period, geography, source stream, evidence type, antibiotic-use rate, resistance evidence, marker, quality score, organization label, and limitation.

pathogen antimicrobial reporting period source stream measured value antibiotic use susceptibility proxy marker organization label limitation

Value cards summarize the visible records. Open a card to review the records behind the value.

AI-ready dataset

Prepared for RAG, model features, APIs, and governed delivery.

The AMR package is structured for retrieval and modeling, not just visual review.

Structured observation rows

Rows preserve pathogen, antimicrobial, reporting period, geography, evidence type, measured value, denominator fields when published, quality score, and limitation notes.

RAG-ready retrieval records

Exports include JSONL records with source context, normalized labels, reporting period metadata, organization-level provenance, and limitation text for retrieval workflows.

Model-feature tables

Feature exports prepare pathogen-drug, geography, time, marker, support-level, and source-quality fields for notebooks, forecasting, anomaly detection, and downstream models.

Governed delivery package

Schema, source lineage, data-quality records, package manifest, CSV, JSONL, and API-ready JSON move with the dataset for enterprise provisioning.

Observation geography

Map of measurable public evidence

Locations are grouped at the most precise level published by the source.

Evidence timeline and source mix Open for reporting years, source streams, and pathogen-drug group summaries.
Reporting periods

Year-by-year evidence timeline

Rate-supporting Marker-supporting Context

Source streams

Pathogen-drug values

DeepWave integrated dataset

Integrated dataset preview

These rows are compiled from public antimicrobial resistance sources after normalization by pathogen, drug, year, geography, source stream, evidence type, value, support level, quality, and limitation.

View amr_observations.csv columns

Use this column list when preparing imports, joining to another table, or reviewing the CSV structure. The default view above shows the dataset as geography, pathogen/drug, and time evidence.

observation_id
pathogen
pathogen_normalized
antimicrobial
antimicrobial_class
year
observation_date
observation_start_date
observation_end_date
reporting_period
date_precision
geography_level
country
state
county_if_available
location_name
location_precision
state_abbreviation
state_fips
hhs_region
location_latitude
location_longitude
location_source
location_notes
source_stream
evidence_type
resistant_count
tested_count
resistance_percent
value
value_unit
gene_or_marker
source_name
source_owner
source_record_id
source_url
source_publication_date
retrieval_date
method_or_definition
support_level
quality_score
export_status
limitations
Included data

What's included

Reference organizations

Organization-level AMR provenance

Use boundaries
Counts and percentages appear only when the public source supports them.

Values come from public source tables or named source summaries. Denominator-backed rows, marker rows, and context rows are separated so buyers can see exactly what each record can support. This dataset is not clinical guidance or an official public-health determination.